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科研合作伙伴

科研

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合作伙伴

fariba p
Fariba Assadi-Porter, 博士

生物化学系

威斯康辛大学-麦迪逊分校

美国

jinyi
Jin-Yi Cai, 博士

计算机系

威斯康辛大学-麦迪逊分校

美国

zhangsuchun
Su-Chun Zhang, M.D., 博士
Waisman Center

威斯康辛大学-麦迪逊分校

美国 

weickjason
Jason P. Weick, 博士

神经科学系
新墨西哥大学
美国

cristina p
Cristina Cruz, 博士

植物生物学系
里斯本大学

葡萄牙

anon
Marta Delgado, 博士生

植物生物学系
里斯本大学

葡萄牙

 anon
Teresa Dias, 博士生

环境生物学中心
里斯本大学

葡萄牙

jose p
José Manuel Fonseca, 博士 

新技术开发研究所
葡萄牙

fggaliba
Gábor Galiba, 博士

植物分子生物系
农业研究中心

匈牙利科学院

keith p
Keith Hazelton
anon
Larry A. Lambe, 
博士 

mason
Patrick Masson, 博士

遗传学系
威斯康辛大学-麦迪逊分校

美国

nobu p
Nobutaka Mitsuda, 博士

基因调控研究组
国家高级工业科学技术研究所

andre p
André Mora, 博士

新技术开发研究所
葡萄牙

nam h g
Hong Gil Nam, 博士

生命科学系
韩国浦项工科大学

anon
Masaru Ohme-Takagi, 博士

基因调控研究组
国家高级工业科学技术研究所
日本

alexandre p
Alexandre Ferreira Ramos, 博士

圣保罗大学
巴西

 rita p
Rita A. Ribeiro, 博士

新技术开发研究所
葡萄牙

islukvin
Igor Slukvin, MD, 博士

病理学&医学实验系

威斯康辛大学-麦迪逊分校

美国

jernej-tonejc
Jernej Tonejc, 博士

anon

Luís Correia, 博士 

信息学系

里斯本大学

葡萄牙

anon
Yoshiharu Y. Yamamoto, 博士

植物分子生理学研究室

岐阜大学
beatriz p

Beatriz Carmo, 博士

信息学系

里斯本大学

葡萄牙

 

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科研合作伙伴

科研

及其他活

相关新

 

阿米尔. 阿沙第 

数学系教授2013 Jan 18-Harbin-DragonJacket

地址

Van Vleck 楼 811号

林肯道480号

数学系

威斯康星大学-麦迪逊

麦迪逊, 威斯康星州 53706

 

附属院系

 

研究方向

  •  抽象数学:微分拓扑学, 微分几何学
  • 应用和信息数学:信息科学,问题,大数据研究,超级计算信息学
  • 跨领域研究:信息神经学,视觉图像科学,生物信息理论,系统生物学

 

数学家谱项目- 阿米尔. 阿沙第

 

系方式

电话:(608) 263-8891

邮件:ahassadi [AT] wisc [DOT] edu

 

个人主

 http://www.math.wisc.edu/~assadi/ 

 

论文发表

击查看论文

 

研究基金

实验均由美国国家科学基金会,美国国家生研究院以及维斯康辛大学校长和教务办公室赞助

 

nsf logo new transparent   nih logo transparent    UW

 

 

Liqi Xu

EducationProfile Picture-Liqi

University of Wisconsin-Madison                                                                                                               

Bachelor of Science in Computer Sciences and Mathematics (May, 2015)

 

Research Interests

  • Data Analysis

Computer Skills

  • Java
  • C
  • C++
  • SQL
  • .NET

mbparsa

Mohammadbagher Parsa Gharamaleki

Profile

Research Scholar     2012-Present

• University of Wisconsin, Madison, USA

• Specialization: Computational systems biology 

Research Assistant     2011-2012

• IPM and Tarbiat Modares University, Tehran, Iran

• Specialization: Structural bioinformatics 

 

Research interests                                                                   gharamaleki@wisc.edu

  • Computational systems biology
  • Evolotionary systems biology
  • Structural bioinformatics


Computer skills 

  •  OS: Linux, MS Windows, Mac
  •  Programming: Python, C++ and familiar with R
  •  Development: MATLAB
  •  Molecular Dynamics: NAMD 
  •  Image Processing: ImageJ, CellProfile
  •  Other software: AutoDuck, VMD, Hyperchem, SAS, Reference Manager. 

Statistical skills

  • Classification and Clustering algorithms
  •   General linear modeling
  •  Analysis of variance 
  • Multiple linear regressions

Professional techniques

  • PCR systems
  •  DNA, Protein extraction and electrophoresis           
  •  Light microscopy techniques
  •  Plant tissue culture techniques  

 

Research Experiences         2007-Present

  • Computational analysis of transcriptomic networks in cell decision-making process from stem cell to neurons, UW Madison.
  • Developing an adaptive predictive model to discover the dynamics of diabetic retinopathy (DR) progress in a DR Mice model, UW Madison.
  • Developing an algorithm for identification of continuous-domains in multi-domain proteins, IPM Bioinformatics Group.
  • Quantifying phenotypic variation and genomic mechanisms of senescence in Arabidopsis thaliana, UW Madison.
  • Developing and engineering an automated high throughput imaging and analysis system, UW Madison.
  • A comparative cytogenetic study of three species of Ferula genus, Institute of Medicinal Plant.
  • Callus induction and regeneration in Galbanum (Ferula gummosa), Institute of Medicinal Plant.
  • A physiological study on seed germination and dormancy breaking of Syrian Mesquite (Prosopis farcta), Shahed University.

 

Teaching Experiences

  • Attending in the International Teaching Assistant (ITA) training program, ESL department, UW-Madison, USA, 2013.
  • Mentoring of undergraduate students, department of Mathematics, UW-Madison, USA, 2013.
  • Bioinformatics, taught by Dr. Arab, Tarbiat Modares University, Tehran, Iran, 2011.
  • Experiment design, taught by Dr. Ahmadi, Shahed University, Tehran, Iran, 2007.

Honors/Awards Teaching Experiences

  • Research scholarship, UW Madison, 2012
  • Short-term fellowship for top student, Isfahan University of Technology,  2010
  • Rank of 13th in the nationwide Olympiad of Plant breeding,  2008
  • Award for 2nd top undergraduate student, Shahed University, 2008

Affiliations Honors/Awards

  • IPM Bioinformatics group
  • Iranian Society of Genetics


Software/Patent

PUTracer: a novel method for detecting protein structural domains, server address: http://bioinf.modares.ac.ir/software/PUTracer

 

Recent Publication

S. Sh. Arab, MB. Parsa, Z. Pashandi, R. Mobasseri, “PUTracer: a novel method for identification of continuous-domains in multi-domain proteins, Journal of Bioinformatics and Computational Biology, Vol. 11, no. 1, 2013.(doi: 10.1142/S021972001340012X)

Current Projects  

 Developing an adaptive predictive model to discover the dynamics of diabetic retinopathy (DR) progress in a DR Mice model, UW Madison.

Educational background:

Qian Meng

QianEducation

Bachelor of Science in Applied Mathematics, School of Mathematical Sciences, Peking University, China, (2012.7)                                                        
Master of Science in Statistics, Department of Statistics, University of Connecticut, (2012.9-present)

Research Experience

 “Research on China's Multi-level Innovational Financial System Leading to an Entrepreneurial Economy ”(in a group led by Daoxu Zhou, the Director of Policy Studies Department, China Insurance Regulatory Commission), (2010.8)

Campus Activities & Work

2006.9 -2007.7: Commissary in charge of organization of Class, School of Mathematical Sciences;
2007.3 -2007.7: Member of Academic & Practice Department, Peking University;
2007.7 -2008.7: Senior Assistant of Academic & Prctice Department, Peking University.

Social Practice & Research

2008.6 -2008.7: Participated in social practice and research in Xuwen, Guangdong, in the Social Practice Team of SMS.

Book

Statistics: Discovering Your Future Power (Expected: Fall, 2013)

Technical Skills

  • SAS
  • R
  • C++
  • Matlab


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